Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN05421747_11372 | Not Available | Positive | 3249423 - 3250397 | 35081.0 |
| tatd dnase family protein | SAMN05421747_11373 | Not Available | Positive | 3250463 - 3251239 | 28599.1 |
| l-asparaginase | SAMN05421747_11374 | Not Available | Positive | 3251267 - 3252283 | 37951.5 |
| ketosteroid isomerase homolog | SAMN05421747_11375 | Not Available | Negative | 3252302 - 3252727 | 15309.2 |
| 2-dehydro-3-deoxyglucarate aldolase/4-hydroxy-2-oxoheptanedioate aldolase | SAMN05421747_11376 | Not Available | Negative | 3252724 - 3253500 | 27694.9 |
| predicted kinase, aminoglycoside phosphotransferase (apt) family | SAMN05421747_11377 | Not Available | Negative | 3253497 - 3254585 | 40829.3 |
| bile acid:na+ symporter, bass family | SAMN05421747_11378 | Not Available | Negative | 3254591 - 3255598 | 35642.2 |
| hypothetical protein | SAMN05421747_11379 | Not Available | Negative | 3255780 - 3256487 | 26059.1 |
| bnr repeat-like domain-containing protein | SAMN05421747_11380 | Not Available | Negative | 3256523 - 3257833 | 48406.1 |
| starch-binding associating with outer membrane | SAMN05421747_11381 | Not Available | Negative | 3257865 - 3259517 | 62903.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
