Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN05421747_101268 | Not Available | Negative | 369936 - 370853 | 33896.6 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | SAMN05421747_101269 | Not Available | Negative | 370878 - 371525 | 23407.3 |
| selenoprotein w-related protein | SAMN05421747_101270 | Not Available | Positive | 371923 - 372201 | 10344.7 |
| iron complex outermembrane recepter protein | SAMN05421747_101271 | Not Available | Negative | 372496 - 374802 | 84454.0 |
| hypothetical protein | SAMN05421747_101272 | Not Available | Negative | 375018 - 375404 | 14631.0 |
| l-aspartate 1-decarboxylase | SAMN05421747_101273 | Not Available | Negative | 375494 - 375844 | 12930.7 |
| pantoate--beta-alanine ligase | SAMN05421747_101274 | Not Available | Negative | 375974 - 376813 | 31485.1 |
| starch synthase | SAMN05421747_101275 | Not Available | Positive | 376962 - 377795 | 31507.4 |
| protein of unknown function | SAMN05421747_101276 | Not Available | Positive | 377819 - 379297 | 53576.4 |
| gliding motility-associated lipoprotein gldj/gliding motility-associated lipoprotein gldj,tigr03530 | SAMN05421747_101277 | Not Available | Negative | 379398 - 380966 | 58952.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
