Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_1132 | Not Available | Positive | 3150697 - 3152010 | 47116.8 |
| zinc carboxypeptidase | SAMN05421747_1133 | Not Available | Positive | 3152255 - 3154963 | 99883.5 |
| zinc carboxypeptidase | SAMN05421747_1134 | Not Available | Positive | 3154976 - 3157702 | 101262.0 |
| sec-independent protein translocase protein tata | SAMN05421747_1135 | Not Available | Positive | 3157784 - 3158254 | 17250.9 |
| uncharacterized protein | SAMN05421747_1136 | Not Available | Positive | 3158276 - 3160519 | 83042.8 |
| cysteine synthase b | SAMN05421747_1137 | Not Available | Negative | 3160541 - 3161413 | 31595.0 |
| serine o-acetyltransferase | SAMN05421747_1138 | Not Available | Negative | 3161415 - 3162227 | 29973.9 |
| protein of unknown function | SAMN05421747_1139 | Not Available | Negative | 3162322 - 3162705 | 14391.7 |
| hypothetical protein | SAMN05421747_11310 | Not Available | Negative | 3162683 - 3163594 | 33858.7 |
| protein of unknown function | SAMN05421747_11311 | Not Available | Positive | 3163636 - 3164184 | 20636.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
