Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin-like phospholipase/acyl hydrolase | SAMN05421747_112115 | Not Available | Negative | 3126795 - 3127850 | 39055.1 |
| ammonium transporter, amt family | SAMN05421747_112116 | Not Available | Positive | 3128229 - 3129566 | 46722.2 |
| putative beta-barrel porin-2, ompl-like. bbp2 | SAMN05421747_112117 | Not Available | Positive | 3129696 - 3130742 | 37707.1 |
| hypothetical protein | SAMN05421747_112118 | Not Available | Positive | 3130939 - 3131514 | 21093.0 |
| molecular chaperone htpg | SAMN05421747_112119 | Not Available | Positive | 3131965 - 3133854 | 71637.1 |
| Trna-his | Not Available | Not Available | Positive | 3133918 - 3133994 | Not Available |
| glucosylglycerol-phosphate synthase | SAMN05421747_112121 | Not Available | Negative | 3134029 - 3136296 | 85628.9 |
| uncharacterized hydrophobic domain-containing protein | SAMN05421747_112122 | Not Available | Negative | 3136522 - 3137847 | 49271.6 |
| putative transcriptional regulator | SAMN05421747_112123 | Not Available | Negative | 3137897 - 3138463 | 21093.9 |
| 5'-nucleotidase | SAMN05421747_112124 | Not Available | Negative | 3138520 - 3139269 | 27295.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
