Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_112105 | Not Available | Negative | 3117570 - 3119102 | 56825.3 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN05421747_112106 | Not Available | Positive | 3119182 - 3119967 | 28821.9 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN05421747_112107 | Not Available | Positive | 3119970 - 3120743 | 28685.7 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN05421747_112108 | Not Available | Positive | 3120747 - 3121733 | 35215.3 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | SAMN05421747_112109 | Not Available | Negative | 3121814 - 3123133 | 48952.7 |
| thymidylate synthase | SAMN05421747_112110 | Not Available | Positive | 3123194 - 3124015 | 31507.9 |
| dihydrofolate reductase | SAMN05421747_112111 | Not Available | Positive | 3124025 - 3124531 | 18959.4 |
| small-conductance mechanosensitive channel | SAMN05421747_112112 | Not Available | Positive | 3124509 - 3125402 | 33276.8 |
| pantothenate kinase | SAMN05421747_112113 | Not Available | Negative | 3125403 - 3126359 | 36514.9 |
| methylglyoxal synthase | SAMN05421747_112114 | Not Available | Negative | 3126402 - 3126770 | 13216.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
