Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin synthase | SAMN05421747_11295 | Not Available | Negative | 3109177 - 3109806 | 22892.2 |
| apolipoprotein n-acyltransferase | SAMN05421747_11296 | Not Available | Negative | 3109806 - 3111407 | 59801.9 |
| short c-terminal domain-containing protein | SAMN05421747_11297 | Not Available | Negative | 3111425 - 3112027 | 22849.6 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN05421747_11298 | Not Available | Negative | 3112052 - 3112717 | 24349.6 |
| seryl-trna synthetase | SAMN05421747_11299 | Not Available | Positive | 3112809 - 3114080 | 47338.8 |
| hypothetical protein | SAMN05421747_112100 | Not Available | Negative | 3114082 - 3114774 | 25663.7 |
| nicotinate phosphoribosyltransferase | SAMN05421747_112101 | Not Available | Negative | 3114776 - 3115939 | 44254.8 |
| lysophospholipase l1 | SAMN05421747_112102 | Not Available | Negative | 3115941 - 3116687 | 27334.5 |
| hypothetical protein | SAMN05421747_112103 | Not Available | Negative | 3116839 - 3117060 | 8019.22 |
| hypothetical protein | SAMN05421747_112104 | Not Available | Negative | 3117026 - 3117157 | 4964.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
