Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05421747_111126 | Not Available | Negative | 2982692 - 2983930 | 44954.5 |
| iron complex outermembrane recepter protein | SAMN05421747_111127 | Not Available | Negative | 2984006 - 2986471 | 92236.0 |
| a/g-specific adenine glycosylase | SAMN05421747_111129 | Not Available | Positive | 2986722 - 2987780 | 40021.2 |
| single-strand dna-binding protein | SAMN05421747_111130 | Not Available | Positive | 2987787 - 2988257 | 17558.5 |
| phenylalanyl-trna synthetase alpha chain | SAMN05421747_111131 | Not Available | Positive | 2988305 - 2989342 | 39534.1 |
| hypothetical protein | SAMN05421747_111132 | Not Available | Positive | 2989350 - 2989769 | 14856.2 |
| regulatory protein, tetr family | SAMN05421747_111133 | Not Available | Positive | 2989769 - 2990344 | 22199.7 |
| 23s rrna (uracil1939-c5)-methyltransferase | SAMN05421747_111134 | Not Available | Positive | 2990378 - 2991793 | 53860.4 |
| hypothetical protein | SAMN05421747_111135 | Not Available | Positive | 2991799 - 2992197 | 14921.8 |
| carboxypepd_reg-like domain-containing protein | SAMN05421747_111136 | Not Available | Positive | 2992260 - 2993021 | 28473.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
