Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| subtilase family protein | SAMN05421747_111106 | Not Available | Negative | 2961716 - 2963344 | 60513.2 |
| oligopeptidase b | SAMN05421747_111107 | Not Available | Positive | 2963544 - 2965652 | 79492.9 |
| hypothetical protein | SAMN05421747_111108 | Not Available | Negative | 2965661 - 2965876 | 8089.23 |
| hypothetical protein | SAMN05421747_111109 | Not Available | Negative | 2965970 - 2966167 | 7560.28 |
| hypothetical protein | SAMN05421747_111110 | Not Available | Positive | 2966327 - 2967037 | 27094.0 |
| argininosuccinate synthase | SAMN05421747_111111 | Not Available | Positive | 2967062 - 2968252 | 43850.2 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN05421747_111112 | Not Available | Positive | 2968249 - 2969268 | 37160.3 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN05421747_111113 | Not Available | Negative | 2969287 - 2970672 | 50144.1 |
| porphobilinogen synthase | SAMN05421747_111114 | Not Available | Negative | 2970730 - 2971653 | 34084.9 |
| hydroxymethylbilane synthase | SAMN05421747_111115 | Not Available | Negative | 2971730 - 2973367 | 61126.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
