Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN05421747_11196 | Not Available | Negative | 2948530 - 2949969 | 53438.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_11197 | Not Available | Negative | 2949993 - 2953385 | 125446.0 |
| fecr protein | SAMN05421747_11198 | Not Available | Negative | 2953592 - 2954740 | 42008.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421747_11199 | Not Available | Negative | 2954866 - 2955432 | 22502.1 |
| putative intracellular protease/amidase | SAMN05421747_111100 | Not Available | Positive | 2955587 - 2956276 | 24872.7 |
| catalase | SAMN05421747_111101 | Not Available | Negative | 2956639 - 2958777 | 79398.0 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05421747_111102 | Not Available | Positive | 2958906 - 2959694 | 27128.7 |
| recombination protein reca | SAMN05421747_111103 | Not Available | Negative | 2959705 - 2960715 | 36199.9 |
| endonuclease-3 | SAMN05421747_111104 | Not Available | Negative | 2960764 - 2961417 | 24488.6 |
| hypothetical protein | SAMN05421747_111105 | Not Available | Negative | 2961433 - 2961627 | 7613.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
