Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heparinase ii/iii-like protein | SAMN05421747_11136 | Not Available | Positive | 2895836 - 2897782 | 73884.2 |
| glycosyl hydrolase family 88 | SAMN05421747_11137 | Not Available | Positive | 2897817 - 2899022 | 45102.9 |
| hexosaminidase | SAMN05421747_11138 | Not Available | Positive | 2899039 - 2900697 | 63413.6 |
| glucosamine-6-phosphate deaminase | SAMN05421747_11139 | Not Available | Positive | 2900835 - 2902766 | 73087.0 |
| tonb-dependent receptor plug domain | SAMN05421747_11140 | Not Available | Positive | 2903204 - 2903863 | 23224.8 |
| tonb dependent receptor | SAMN05421747_11141 | Not Available | Positive | 2903817 - 2905037 | 47527.4 |
| starch-binding associating with outer membrane | SAMN05421747_11142 | Not Available | Positive | 2905070 - 2906902 | 69490.8 |
| fucose permease | SAMN05421747_11143 | Not Available | Negative | 2906990 - 2908201 | 42864.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421747_11144 | Not Available | Positive | 2908391 - 2909164 | 26576.8 |
| putative membrane protein | SAMN05421747_11145 | Not Available | Negative | 2909185 - 2909544 | 12912.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
