Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex outermembrane recepter protein | SAMN05421747_11126 | Not Available | Positive | 2879416 - 2882085 | 96864.6 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN05421747_11127 | Not Available | Positive | 2882267 - 2882620 | 13513.4 |
| methionine aminotransferase | SAMN05421747_11128 | Not Available | Positive | 2882675 - 2883832 | 43156.8 |
| 7-keto-8-aminopelargonate synthetase | SAMN05421747_11129 | Not Available | Positive | 2883844 - 2884878 | 36941.9 |
| oxidoreductase family, nad-binding rossmann fold | SAMN05421747_11130 | Not Available | Negative | 2884875 - 2886290 | 52453.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421747_11131 | Not Available | Positive | 2886580 - 2887146 | 21548.3 |
| fecr protein | SAMN05421747_11132 | Not Available | Positive | 2887237 - 2888427 | 44385.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_11133 | Not Available | Positive | 2888544 - 2891972 | 128198.0 |
| starch-binding associating with outer membrane | SAMN05421747_11134 | Not Available | Positive | 2891981 - 2893810 | 70379.2 |
| heparinase ii/iii-like protein | SAMN05421747_11135 | Not Available | Positive | 2893930 - 2895852 | 72468.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
