Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| linoleoyl-coa desaturase | SAMN05421747_110115 | Not Available | Positive | 2823858 - 2824997 | 43810.5 |
| cold shock protein, cspa family | SAMN05421747_110116 | Not Available | Negative | 2824994 - 2825452 | 17048.9 |
| atp-dependent rna helicase rhle | SAMN05421747_110117 | Not Available | Negative | 2825486 - 2826727 | 45270.2 |
| hypothetical protein | SAMN05421747_110118 | Not Available | Positive | 2826751 - 2826873 | 4808.87 |
| eama-like transporter family protein | SAMN05421747_110119 | Not Available | Positive | 2827085 - 2827858 | 28686.1 |
| carboxypepd_reg-like domain-containing protein | SAMN05421747_110120 | Not Available | Positive | 2827928 - 2830477 | 96826.3 |
| enoyl-coa hydratase | SAMN05421747_110121 | Not Available | Positive | 2830477 - 2831250 | 27320.8 |
| predicted purr-regulated permease perm | SAMN05421747_110122 | Not Available | Positive | 2831291 - 2832331 | 38280.4 |
| protein of unknown function | SAMN05421747_110123 | Not Available | Positive | 2832376 - 2833464 | 40763.0 |
| glycyl-trna synthetase | SAMN05421747_110124 | Not Available | Positive | 2833552 - 2835018 | 56302.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
