Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_110105 | Not Available | Negative | 2811946 - 2812512 | 22621.4 |
| carboxyl-terminal processing protease | SAMN05421747_110106 | Not Available | Positive | 2812684 - 2814291 | 59293.8 |
| abc-type lipoprotein export system, atpase component | SAMN05421747_110107 | Not Available | Negative | 2814257 - 2814985 | 27250.8 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05421747_110108 | Not Available | Negative | 2815405 - 2815950 | 20895.1 |
| phosphoglucomutase | SAMN05421747_110109 | Not Available | Negative | 2815952 - 2817688 | 64135.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421747_110110 | Not Available | Negative | 2817774 - 2818649 | 31070.5 |
| enoyl-coa hydratase/carnithine racemase | SAMN05421747_110111 | Not Available | Negative | 2818603 - 2819406 | 30376.3 |
| tonb-dependent outer membrane receptor, susc/raga subfamily, signature region | SAMN05421747_110112 | Not Available | Negative | 2819456 - 2822161 | 99912.6 |
| phosphoribosylamine--glycine ligase | SAMN05421747_110113 | Not Available | Positive | 2822319 - 2823593 | 45733.6 |
| Trna-glu | Not Available | Not Available | Positive | 2823657 - 2823728 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
