Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | SAMN05421747_101208 | Not Available | Negative | 272531 - 273622 | 39548.4 |
| d-citramalate synthase | SAMN05421747_101209 | Not Available | Negative | 273670 - 275220 | 57291.3 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN05421747_101210 | Not Available | Negative | 275224 - 275820 | 22371.5 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN05421747_101211 | Not Available | Negative | 275824 - 277224 | 50864.2 |
| 2-isopropylmalate synthase | SAMN05421747_101212 | Not Available | Negative | 277294 - 278802 | 55442.0 |
| ketol-acid reductoisomerase | SAMN05421747_101213 | Not Available | Negative | 278876 - 279934 | 39000.1 |
| dinb superfamily protein | SAMN05421747_101214 | Not Available | Negative | 280019 - 280498 | 18044.5 |
| acetolactate synthase, small subunit | SAMN05421747_101215 | Not Available | Negative | 280518 - 281123 | 23349.7 |
| acetolactate synthase, large subunit | SAMN05421747_101216 | Not Available | Negative | 281127 - 282869 | 63486.7 |
| dihydroxy-acid dehydratase | SAMN05421747_101217 | Not Available | Negative | 282926 - 284623 | 60193.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
