Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit b | SAMN05421747_101178 | Not Available | Negative | 235867 - 236370 | 18575.9 |
| nadh-quinone oxidoreductase subunit a | SAMN05421747_101179 | Not Available | Negative | 236367 - 236966 | 22107.2 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN05421747_101180 | Not Available | Negative | 237071 - 238411 | 49006.8 |
| hypothetical protein | SAMN05421747_101181 | Not Available | Negative | 238528 - 239217 | 25241.8 |
| ribosome recycling factor | SAMN05421747_101182 | Not Available | Negative | 239426 - 239989 | 20823.0 |
| uridylate kinase | SAMN05421747_101183 | Not Available | Negative | 240021 - 240728 | 26136.1 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | SAMN05421747_101184 | Not Available | Negative | 240795 - 241928 | 41620.1 |
| uncharacterized membrane protein | SAMN05421747_101185 | Not Available | Positive | 242076 - 243323 | 44974.8 |
| putative atpase | SAMN05421747_101186 | Not Available | Negative | 243333 - 244613 | 47453.0 |
| hypothetical protein | SAMN05421747_101187 | Not Available | Positive | 244774 - 245910 | 42361.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
