Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421747_101168 | Not Available | Positive | 219314 - 220501 | 43924.9 |
| hypothetical protein | SAMN05421747_101169 | Not Available | Positive | 220519 - 221775 | 45258.5 |
| glycosyl hydrolases family 16 | SAMN05421747_101170 | Not Available | Positive | 221812 - 222657 | 32292.0 |
| protein of unknown function | SAMN05421747_101171 | Not Available | Positive | 222660 - 225137 | 93008.4 |
| duf1680 family protein | SAMN05421747_101172 | Not Available | Positive | 225161 - 229378 | 159195.0 |
| predicted dehydrogenase | SAMN05421747_101173 | Not Available | Positive | 229454 - 230725 | 46933.0 |
| hypothetical protein | SAMN05421747_101174 | Not Available | Positive | 230808 - 232037 | 46884.3 |
| rhamnogalacturonyl hydrolase yesr | SAMN05421747_101175 | Not Available | Positive | 232055 - 234055 | 76963.4 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMN05421747_101176 | Not Available | Negative | 234061 - 234573 | 17604.5 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | SAMN05421747_101177 | Not Available | Negative | 234699 - 235841 | 42530.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
