Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05421747_101158 | Not Available | Negative | 200923 - 201621 | 27409.2 |
| glycosyl-hydrolase 97 c-terminal, oligomerisation | SAMN05421747_101159 | Not Available | Positive | 201903 - 203849 | 72571.8 |
| alpha-n-arabinofuranosidase | SAMN05421747_101160 | Not Available | Positive | 203859 - 205436 | 59025.9 |
| alpha-l-arabinofuranosidase | SAMN05421747_101161 | Not Available | Positive | 205462 - 207441 | 73853.1 |
| arabinan endo-1,5-alpha-l-arabinosidase | SAMN05421747_101162 | Not Available | Positive | 207446 - 208261 | 30345.0 |
| hypothetical protein | SAMN05421747_101163 | Not Available | Negative | 208225 - 208380 | 5644.13 |
| two component regulator propeller | SAMN05421747_101164 | Not Available | Positive | 208543 - 212640 | 153981.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_101165 | Not Available | Positive | 212872 - 216075 | 118668.0 |
| starch-binding associating with outer membrane | SAMN05421747_101166 | Not Available | Positive | 216160 - 218034 | 71486.2 |
| protein of unknown function | SAMN05421747_101167 | Not Available | Positive | 218062 - 219273 | 45129.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
