Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-rhamnosidase | SAMN05421747_10628 | Not Available | Negative | 1958254 - 1960827 | 96666.9 |
| hypothetical protein | SAMN05421747_10629 | Not Available | Positive | 1960959 - 1961585 | 23092.0 |
| hypothetical protein | SAMN05421747_10630 | Not Available | Positive | 1961539 - 1962114 | 21600.6 |
| hypothetical protein | SAMN05421747_10631 | Not Available | Positive | 1962095 - 1962820 | 27798.8 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN05421747_10632 | Not Available | Negative | 1962897 - 1963649 | 29863.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421747_10633 | Not Available | Positive | 1963788 - 1964450 | 25578.4 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN05421747_10634 | Not Available | Positive | 1964452 - 1965402 | 35051.8 |
| hypothetical protein | SAMN05421747_10635 | Not Available | Positive | 1965402 - 1967021 | 57581.9 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421747_10636 | Not Available | Positive | 1967109 - 1967672 | 19959.8 |
| hypothetical protein | SAMN05421747_10637 | Not Available | Positive | 1967682 - 1968707 | 35481.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
