Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposase | SAMN05421747_105171 | Not Available | Positive | 1928248 - 1928904 | 25709.3 |
| predicted phosphoesterase | SAMN05421747_105172 | Not Available | Negative | 1929179 - 1929808 | 24094.9 |
| hypothetical protein | SAMN05421747_105173 | Not Available | Negative | 1930133 - 1930210 | 3019.71 |
| hypothetical protein | SAMN05421747_1061 | Not Available | Negative | 1930212 - 1931237 | 38681.1 |
| hypothetical protein | SAMN05421747_1062 | Not Available | Negative | 1931270 - 1931830 | 21504.8 |
| hypothetical protein | SAMN05421747_1063 | Not Available | Positive | 1931860 - 1932840 | 36502.6 |
| hypothetical protein | SAMN05421747_1064 | Not Available | Positive | 1933042 - 1933515 | 18224.3 |
| hypothetical protein | SAMN05421747_1065 | Not Available | Positive | 1934025 - 1934708 | 24940.6 |
| hypothetical protein | SAMN05421747_1066 | Not Available | Positive | 1934788 - 1935228 | 16433.9 |
| hypothetical protein | SAMN05421747_1067 | Not Available | Positive | 1935340 - 1935579 | 8216.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
