Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine c-acetyltransferase | SAMN05421747_105151 | Not Available | Negative | 1901950 - 1902264 | 11561.6 |
| hypothetical protein | SAMN05421747_105152 | Not Available | Positive | 1902311 - 1902436 | 4523.54 |
| gdsl-like lipase/acylhydrolase family protein | SAMN05421747_105153 | Not Available | Negative | 1902708 - 1903949 | 46646.4 |
| hypothetical protein | SAMN05421747_105154 | Not Available | Negative | 1903991 - 1904233 | 9107.32 |
| polysaccharide pyruvyl transferase | SAMN05421747_105155 | Not Available | Negative | 1904278 - 1905594 | 49211.0 |
| beta-glucanase, gh16 family | SAMN05421747_105156 | Not Available | Negative | 1905581 - 1906453 | 33361.1 |
| galactonate dehydratase | SAMN05421747_105157 | Not Available | Negative | 1906450 - 1907625 | 43728.6 |
| 3alpha(or 20beta)-hydroxysteroid dehydrogenase/3-oxoacyl-[acyl-carrier protein] reductase | SAMN05421747_105158 | Not Available | Negative | 1907668 - 1908444 | 27903.6 |
| sugar phosphate permease | SAMN05421747_105159 | Not Available | Negative | 1908441 - 1909682 | 45726.8 |
| right handed beta helix region | SAMN05421747_105160 | Not Available | Negative | 1909717 - 1911711 | 74178.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
