Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate--alanine ligase | SAMN05421747_105131 | Not Available | Negative | 1875145 - 1876500 | 49685.4 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | SAMN05421747_105132 | Not Available | Negative | 1876531 - 1877637 | 39972.1 |
| cell division protein ftsw | SAMN05421747_105133 | Not Available | Negative | 1877668 - 1878843 | 42581.4 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | SAMN05421747_105134 | Not Available | Negative | 1878891 - 1880264 | 50649.7 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SAMN05421747_105135 | Not Available | Negative | 1880267 - 1881511 | 46126.2 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | SAMN05421747_105136 | Not Available | Negative | 1881519 - 1882976 | 52994.5 |
| cell division protein ftsi (penicillin-binding protein 3) | SAMN05421747_105137 | Not Available | Negative | 1882973 - 1885066 | 77111.1 |
| hypothetical protein | SAMN05421747_105138 | Not Available | Negative | 1885109 - 1885513 | 15342.3 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN05421747_105139 | Not Available | Negative | 1885522 - 1886442 | 34579.7 |
| mraz protein | SAMN05421747_105140 | Not Available | Negative | 1886435 - 1886908 | 17874.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
