Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease p protein component | SAMN05421747_105121 | Not Available | Negative | 1864816 - 1865202 | 15370.0 |
| uncharacterized iron-regulated protein | SAMN05421747_105122 | Not Available | Positive | 1865605 - 1866477 | 32778.5 |
| large conductance mechanosensitive channel | SAMN05421747_105123 | Not Available | Negative | 1866562 - 1866972 | 14825.4 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421747_105124 | Not Available | Positive | 1867260 - 1867901 | 23686.8 |
| sugar phosphate isomerase/epimerase | SAMN05421747_105125 | Not Available | Negative | 1867905 - 1869017 | 41293.9 |
| histone h1-like protein hc1 | SAMN05421747_105126 | Not Available | Negative | 1869190 - 1869375 | 6776.13 |
| glycine c-acetyltransferase | SAMN05421747_105127 | Not Available | Negative | 1869660 - 1870904 | 45970.5 |
| cell division protein ftsz | SAMN05421747_105128 | Not Available | Negative | 1871099 - 1872796 | 61718.1 |
| cell division protein ftsa | SAMN05421747_105129 | Not Available | Negative | 1872936 - 1874282 | 49079.2 |
| cell division protein ftsq | SAMN05421747_105130 | Not Available | Negative | 1874322 - 1875152 | 31164.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
