Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| solute:na+ symporter, sss family | SAMN05421747_105111 | Not Available | Negative | 1852335 - 1853882 | 55899.5 |
| arac-type dna-binding protein | SAMN05421747_105112 | Not Available | Positive | 1854108 - 1854995 | 34396.7 |
| dna gyrase subunit b | SAMN05421747_105113 | Not Available | Negative | 1855051 - 1857009 | 72611.5 |
| outer membrane protein | SAMN05421747_105114 | Not Available | Positive | 1857132 - 1857734 | 22066.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421747_105115 | Not Available | Positive | 1857980 - 1860271 | 86234.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421747_105116 | Not Available | Positive | 1860222 - 1861232 | 37289.9 |
| predicted glycosyl hydrolase, gh43/duf377 family | SAMN05421747_105117 | Not Available | Negative | 1861218 - 1862717 | 57405.2 |
| magnesium transporter | SAMN05421747_105118 | Not Available | Positive | 1862819 - 1863721 | 34902.4 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN05421747_105119 | Not Available | Negative | 1863725 - 1864423 | 25353.4 |
| hypothetical protein | SAMN05421747_105120 | Not Available | Negative | 1864565 - 1864819 | 9627.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
