Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate-selective porin o and p | SAMN05421747_10551 | Not Available | Positive | 1756798 - 1757979 | 45062.6 |
| lipid-a-disaccharide synthase | SAMN05421747_10552 | Not Available | Positive | 1757976 - 1759097 | 41935.3 |
| hypothetical protein | SAMN05421747_10553 | Not Available | Negative | 1759122 - 1759844 | 27336.3 |
| 3-dehydroquinate synthase | SAMN05421747_10554 | Not Available | Negative | 1759855 - 1760934 | 39504.2 |
| hypothetical protein | SAMN05421747_10555 | Not Available | Negative | 1760931 - 1761356 | 15743.2 |
| ribosome-associated protein | SAMN05421747_10556 | Not Available | Negative | 1761360 - 1761572 | 7749.49 |
| proline dehydrogenase | SAMN05421747_10557 | Not Available | Positive | 1761622 - 1762818 | 44807.6 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05421747_10558 | Not Available | Positive | 1762815 - 1763441 | 22762.1 |
| alkaline phosphatase | SAMN05421747_10559 | Not Available | Negative | 1763419 - 1764852 | 51655.9 |
| hypothetical protein | SAMN05421747_10560 | Not Available | Negative | 1764986 - 1766299 | 48279.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
