Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide-binding universal stress protein, uspa family | SAMN05421747_10531 | Not Available | Positive | 1727875 - 1728720 | 31036.8 |
| leucyl-trna synthetase | SAMN05421747_10532 | Not Available | Negative | 1728724 - 1731516 | 105940.0 |
| hypothetical protein | SAMN05421747_10533 | Not Available | Positive | 1731587 - 1731982 | 14943.3 |
| membrane fusion protein, multidrug efflux system | SAMN05421747_10534 | Not Available | Positive | 1732154 - 1733296 | 42012.7 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05421747_10535 | Not Available | Positive | 1733351 - 1737919 | 166347.0 |
| cell division transport system permease protein | SAMN05421747_10536 | Not Available | Positive | 1738016 - 1738894 | 32662.8 |
| protein of unknown function | SAMN05421747_10537 | Not Available | Positive | 1738906 - 1739145 | 8782.13 |
| undecaprenyl-diphosphatase | SAMN05421747_10538 | Not Available | Positive | 1739145 - 1739939 | 28685.0 |
| trna pseudouridine55 synthase | SAMN05421747_10539 | Not Available | Positive | 1739939 - 1740655 | 26790.2 |
| riboflavin kinase / fmn adenylyltransferase | SAMN05421747_10540 | Not Available | Positive | 1740633 - 1741607 | 36740.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
