Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05421747_101138 | Not Available | Positive | 169368 - 170846 | 54846.1 |
| protein of unknown function | SAMN05421747_101139 | Not Available | Positive | 170908 - 172047 | 42033.9 |
| protein of unknown function | SAMN05421747_101140 | Not Available | Positive | 172087 - 173058 | 35812.4 |
| protein of unknown function | SAMN05421747_101141 | Not Available | Positive | 173055 - 174911 | 68691.7 |
| ig-like domain (group 4) | SAMN05421747_101142 | Not Available | Positive | 175405 - 178470 | 113699.0 |
| hypothetical protein | SAMN05421747_101143 | Not Available | Positive | 178558 - 178770 | 7942.63 |
| hypothetical protein | SAMN05421747_101144 | Not Available | Positive | 178778 - 179065 | 11106.4 |
| hypothetical protein | SAMN05421747_101145 | Not Available | Negative | 179234 - 181966 | 101991.0 |
| iron complex outermembrane recepter protein | SAMN05421747_101146 | Not Available | Positive | 182074 - 184431 | 86090.4 |
| arac-type dna-binding protein | SAMN05421747_101147 | Not Available | Negative | 184426 - 185313 | 34561.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
