Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_1051 | Not Available | Positive | 1702109 - 1702495 | 13838.3 |
| hypothetical protein | SAMN05421747_1052 | Not Available | Positive | 1702541 - 1703515 | 34584.1 |
| conserved repeat domain-containing protein/gliding motility-associated c-terminal domain-containing protein | SAMN05421747_1053 | Not Available | Positive | 1703595 - 1704539 | 34065.1 |
| conserved hypothetical protein | SAMN05421747_1054 | Not Available | Negative | 1704604 - 1704795 | 7066.68 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05421747_1055 | Not Available | Negative | 1704799 - 1705281 | 18001.2 |
| regulator of sigma e protease | SAMN05421747_1056 | Not Available | Negative | 1705294 - 1706622 | 48161.6 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | SAMN05421747_1057 | Not Available | Negative | 1706628 - 1707815 | 43028.4 |
| hypothetical protein | SAMN05421747_1058 | Not Available | Negative | 1707815 - 1708600 | 29686.2 |
| predicted dehydrogenase | SAMN05421747_1059 | Not Available | Negative | 1708657 - 1709862 | 44741.6 |
| hypothetical protein | SAMN05421747_10510 | Not Available | Negative | 1710032 - 1710253 | 7971.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
