Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para-aminobenzoate synthetase component 1 | SAMN05421747_104225 | Not Available | Positive | 1692575 - 1693852 | 47674.4 |
| predicted zn-dependent peptidase | SAMN05421747_104226 | Not Available | Negative | 1693859 - 1695148 | 48322.2 |
| predicted zn-dependent peptidase | SAMN05421747_104227 | Not Available | Negative | 1695135 - 1696379 | 46421.2 |
| coproporphyrinogen oxidase | SAMN05421747_104228 | Not Available | Negative | 1696391 - 1697290 | 34237.4 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN05421747_104229 | Not Available | Negative | 1697307 - 1699016 | 61219.1 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | SAMN05421747_104230 | Not Available | Negative | 1699035 - 1700042 | 36913.6 |
| small multidrug resistance pump | SAMN05421747_104231 | Not Available | Negative | 1700291 - 1700617 | 11295.5 |
| dna-binding transcriptional regulator, hxlr family | SAMN05421747_104232 | Not Available | Positive | 1700781 - 1701164 | 14197.5 |
| hypothetical protein | SAMN05421747_104233 | Not Available | Negative | 1701166 - 1701582 | 15665.0 |
| hypothetical protein | SAMN05421747_104234 | Not Available | Negative | 1701632 - 1702108 | 17062.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
