Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ahpc/tsa family protein | SAMN05421747_104215 | Not Available | Positive | 1683303 - 1683917 | 22350.6 |
| cytochrome d ubiquinol oxidase subunit i | SAMN05421747_104216 | Not Available | Positive | 1684023 - 1685366 | 49176.9 |
| cytochrome d ubiquinol oxidase subunit ii | SAMN05421747_104217 | Not Available | Positive | 1685369 - 1686382 | 37508.8 |
| iron-sulfur cluster assembly protein | SAMN05421747_104218 | Not Available | Positive | 1686454 - 1686780 | 12069.2 |
| bacillithiol biosynthesis deacetylase bshb1 | SAMN05421747_104219 | Not Available | Negative | 1686793 - 1687527 | 27538.9 |
| protein of unknown function | SAMN05421747_104220 | Not Available | Negative | 1687570 - 1688193 | 24332.7 |
| hypothetical protein | SAMN05421747_104221 | Not Available | Positive | 1688240 - 1688341 | 3924.75 |
| gtp pyrophosphokinase | SAMN05421747_104222 | Not Available | Positive | 1688322 - 1690526 | 83850.3 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN05421747_104223 | Not Available | Positive | 1690628 - 1691137 | 19705.7 |
| adenylosuccinate synthase | SAMN05421747_104224 | Not Available | Positive | 1691288 - 1692562 | 46584.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
