Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| miniconductance mechanosensitive channel | SAMN05421747_104145 | Not Available | Negative | 1589367 - 1590680 | 49550.0 |
| dna gyrase subunit a | SAMN05421747_104146 | Not Available | Positive | 1590923 - 1593484 | 95732.4 |
| hypothetical protein | SAMN05421747_104147 | Not Available | Positive | 1593456 - 1594601 | 42796.9 |
| tetratricopeptide repeat-containing protein | SAMN05421747_104148 | Not Available | Positive | 1594612 - 1595778 | 43154.5 |
| dihydroorotate dehydrogenase | SAMN05421747_104149 | Not Available | Negative | 1595823 - 1596851 | 37264.1 |
| atp-binding cassette, subfamily f, member 3 | SAMN05421747_104150 | Not Available | Positive | 1596956 - 1598875 | 73097.9 |
| protein of unknown function | SAMN05421747_104151 | Not Available | Positive | 1598872 - 1600167 | 49817.8 |
| branched-chain amino acid aminotransferase | SAMN05421747_104152 | Not Available | Negative | 1600164 - 1601012 | 32681.5 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN05421747_104153 | Not Available | Negative | 1601059 - 1602090 | 38930.7 |
| 1-aminocyclopropane-1-carboxylate deaminase | SAMN05421747_104154 | Not Available | Positive | 1602155 - 1603063 | 33867.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
