Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_104115 | Not Available | Positive | 1552681 - 1553283 | 23334.2 |
| regulatory protein, luxr family | SAMN05421747_104116 | Not Available | Negative | 1553292 - 1553993 | 27103.3 |
| glutaryl-coa dehydrogenase | SAMN05421747_104117 | Not Available | Positive | 1554274 - 1555446 | 43241.1 |
| protein of unknown function | SAMN05421747_104118 | Not Available | Positive | 1555490 - 1556233 | 27166.1 |
| asparagine synthase (glutamine-hydrolysing) | SAMN05421747_104119 | Not Available | Negative | 1556322 - 1558019 | 63926.8 |
| hypothetical protein | SAMN05421747_104120 | Not Available | Negative | 1558148 - 1558315 | 6419.1 |
| phosphoribosylglycinamide formyltransferase-1 | SAMN05421747_104121 | Not Available | Positive | 1558437 - 1559009 | 21739.2 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase | SAMN05421747_104122 | Not Available | Positive | 1559045 - 1560571 | 55822.6 |
| uncharacterized conserved protein yece, duf72 family | SAMN05421747_104123 | Not Available | Positive | 1560587 - 1561459 | 33257.6 |
| 23s rrna pseudouridine955/2504/2580 synthase | SAMN05421747_104124 | Not Available | Negative | 1561483 - 1562226 | 28575.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
