Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate transport system substrate-binding protein | SAMN05421747_10485 | Not Available | Positive | 1523562 - 1524551 | 35745.6 |
| phosphate transport system permease protein | SAMN05421747_10486 | Not Available | Positive | 1524595 - 1525446 | 30798.7 |
| phosphate transport system permease protein | SAMN05421747_10487 | Not Available | Positive | 1525446 - 1526297 | 30197.1 |
| phosphate transport system atp-binding protein | SAMN05421747_10488 | Not Available | Positive | 1526299 - 1527060 | 28449.6 |
| putative efflux protein, mate family | SAMN05421747_10489 | Not Available | Negative | 1527115 - 1528551 | 51848.4 |
| hypothetical protein | SAMN05421747_10490 | Not Available | Negative | 1528648 - 1529088 | 16509.1 |
| hypothetical protein | SAMN05421747_10491 | Not Available | Positive | 1529637 - 1530017 | 14183.1 |
| atp-dependent dna helicase recq | SAMN05421747_10492 | Not Available | Negative | 1530084 - 1532276 | 82599.9 |
| hypothetical protein | SAMN05421747_10493 | Not Available | Negative | 1532308 - 1532514 | 7932.77 |
| mannose-1-phosphate guanylyltransferase | SAMN05421747_10494 | Not Available | Positive | 1532588 - 1533670 | 40381.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
