Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | SAMN05421747_10455 | Not Available | Negative | 1490102 - 1491037 | 34196.9 |
| hypothetical protein | SAMN05421747_10456 | Not Available | Negative | 1491084 - 1491839 | 27485.1 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/beta-phosphoglucomutase family hydrolase | SAMN05421747_10457 | Not Available | Negative | 1491832 - 1492500 | 25090.7 |
| copper chaperone copz | SAMN05421747_10458 | Not Available | Negative | 1492566 - 1492781 | 7380.84 |
| cu2+-exporting atpase | SAMN05421747_10459 | Not Available | Negative | 1492812 - 1495025 | 78266.4 |
| zinc protease | SAMN05421747_10460 | Not Available | Positive | 1495158 - 1498010 | 107208.0 |
| rna polymerase primary sigma factor | SAMN05421747_10461 | Not Available | Negative | 1498103 - 1498963 | 32588.8 |
| methionyl-trna formyltransferase | SAMN05421747_10462 | Not Available | Negative | 1499152 - 1500090 | 34026.4 |
| lipoprotein-releasing system permease protein | SAMN05421747_10463 | Not Available | Positive | 1500169 - 1501389 | 44978.2 |
| kef-type k+ transport system, membrane component kefb | SAMN05421747_10464 | Not Available | Positive | 1501484 - 1503616 | 78456.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
