Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein, yigz family | SAMN05421747_10445 | Not Available | Positive | 1480248 - 1480865 | 23008.7 |
| hypothetical protein | SAMN05421747_10446 | Not Available | Positive | 1480937 - 1481491 | 20005.4 |
| hypothetical protein | SAMN05421747_10447 | Not Available | Positive | 1481488 - 1481901 | 15215.4 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421747_10448 | Not Available | Negative | 1481915 - 1484374 | 91426.5 |
| arac-type dna-binding protein | SAMN05421747_10449 | Not Available | Negative | 1484475 - 1485287 | 30671.1 |
| putative membrane protein | SAMN05421747_10450 | Not Available | Positive | 1485473 - 1486012 | 19544.3 |
| protein of unknown function | SAMN05421747_10451 | Not Available | Negative | 1485990 - 1486682 | 24572.7 |
| hypothetical protein | SAMN05421747_10452 | Not Available | Negative | 1486758 - 1487201 | 16028.8 |
| penicillin amidase | SAMN05421747_10453 | Not Available | Positive | 1487299 - 1489755 | 91928.9 |
| hypothetical protein | SAMN05421747_10454 | Not Available | Positive | 1489762 - 1490124 | 12594.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
