Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor, sigma-70 family | SAMN05421747_101119 | Not Available | Positive | 144230 - 144805 | 22064.6 |
| trypsin-like peptidase domain-containing protein | SAMN05421747_101120 | Not Available | Positive | 144817 - 145917 | 40289.6 |
| alkyl hydroperoxide reductase subunit ahpc (peroxiredoxin) | SAMN05421747_101121 | Not Available | Negative | 145980 - 146615 | 23687.2 |
| ecsc protein family protein | SAMN05421747_101122 | Not Available | Positive | 146719 - 147468 | 28421.1 |
| n-acetylglutamate synthase, gnat family | SAMN05421747_101123 | Not Available | Positive | 147564 - 148010 | 17636.0 |
| helix-turn-helix domain-containing protein | SAMN05421747_101124 | Not Available | Positive | 148036 - 148857 | 31406.8 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN05421747_101125 | Not Available | Positive | 148970 - 149347 | 13784.2 |
| acyl-coa dehydrogenase | SAMN05421747_101126 | Not Available | Positive | 149496 - 150638 | 41768.1 |
| dipeptidyl-peptidase-4 | SAMN05421747_101127 | Not Available | Negative | 150649 - 152841 | 82543.9 |
| xaa-pro aminopeptidase | SAMN05421747_101128 | Not Available | Negative | 152854 - 154245 | 51187.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
