Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_10425 | Not Available | Negative | 1457886 - 1458122 | 8860.13 |
| hypothetical protein | SAMN05421747_10426 | Not Available | Positive | 1458645 - 1459265 | 22676.2 |
| hypothetical protein | SAMN05421747_10427 | Not Available | Negative | 1459323 - 1459784 | 17514.2 |
| hypothetical protein | SAMN05421747_10428 | Not Available | Negative | 1459784 - 1460248 | 17739.0 |
| Trna-phe | Not Available | Not Available | Positive | 1460804 - 1460879 | Not Available |
| pp_01259 | SAMN05421747_10430 | Not Available | Positive | 1461091 - 1462158 | Not Available |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN05421747_10431 | Not Available | Negative | 1462214 - 1463209 | 35783.9 |
| hypothetical protein | SAMN05421747_10432 | Not Available | Negative | 1463217 - 1464065 | 32098.7 |
| 6-phosphofructokinase 1 | SAMN05421747_10433 | Not Available | Negative | 1464062 - 1465045 | 34858.8 |
| 8-oxo-dgtp diphosphatase | SAMN05421747_10434 | Not Available | Positive | 1465290 - 1465988 | 27581.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
