Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage integrase sam-like domain-containing protein | SAMN05421747_1045 | Not Available | Positive | 1442665 - 1444002 | 50643.2 |
| hypothetical protein | SAMN05421747_1046 | Not Available | Positive | 1444002 - 1444937 | 36673.6 |
| dna binding domain-containing protein, excisionase family | SAMN05421747_1047 | Not Available | Positive | 1445067 - 1445342 | 10300.6 |
| hypothetical protein | SAMN05421747_1048 | Not Available | Positive | 1445339 - 1445668 | 12324.0 |
| hypothetical protein | SAMN05421747_1049 | Not Available | Positive | 1445646 - 1446374 | 27968.8 |
| hypothetical protein | SAMN05421747_10410 | Not Available | Positive | 1446376 - 1447374 | 37941.9 |
| hypothetical protein | SAMN05421747_10411 | Not Available | Positive | 1447343 - 1447732 | 15184.2 |
| hypothetical protein | SAMN05421747_10412 | Not Available | Positive | 1447717 - 1448022 | 11817.0 |
| hypothetical protein | SAMN05421747_10413 | Not Available | Positive | 1448240 - 1448473 | 8843.51 |
| hypothetical protein | SAMN05421747_10414 | Not Available | Positive | 1448476 - 1450854 | 89172.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
