Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transmembrane family 220, helix | SAMN05421747_103266 | Not Available | Negative | 1429899 - 1430282 | 14780.3 |
| glycine dehydrogenase | SAMN05421747_103268 | Not Available | Negative | 1430539 - 1433412 | 104229.0 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN05421747_103269 | Not Available | Negative | 1433559 - 1435238 | 59639.5 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN05421747_103270 | Not Available | Negative | 1435289 - 1436284 | 36862.1 |
| hypothetical protein | SAMN05421747_103271 | Not Available | Negative | 1436286 - 1436516 | 8877.65 |
| udpglucose 6-dehydrogenase | SAMN05421747_103272 | Not Available | Negative | 1436637 - 1436840 | 7811.25 |
| hypothetical protein | SAMN05421747_1041 | Not Available | Positive | 1436841 - 1437308 | 17382.1 |
| ipt/tig domain-containing protein | SAMN05421747_1042 | Not Available | Positive | 1437340 - 1439541 | 76912.4 |
| fad dependent oxidoreductase | SAMN05421747_1043 | Not Available | Positive | 1439748 - 1441409 | 62231.1 |
| hypothetical protein | SAMN05421747_1044 | Not Available | Positive | 1441802 - 1442197 | 14480.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
