Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyisoprenoid-binding protein ycei | SAMN05421747_103256 | Not Available | Negative | 1421463 - 1421996 | 19348.5 |
| putative redox protein | SAMN05421747_103257 | Not Available | Negative | 1422096 - 1422512 | 15041.2 |
| o-succinylhomoserine sulfhydrylase | SAMN05421747_103258 | Not Available | Negative | 1422561 - 1423775 | 45179.0 |
| uncharacterized membrane protein ypha, doxx/surf4 family | SAMN05421747_103259 | Not Available | Negative | 1423784 - 1424221 | 16243.4 |
| pyruvate dehydrogenase e1 component beta subunit | SAMN05421747_103260 | Not Available | Negative | 1424314 - 1425300 | 36230.8 |
| futalosine hydrolase | SAMN05421747_103261 | Not Available | Negative | 1425402 - 1425908 | 18076.5 |
| tetraacyldisaccharide 4'-kinase | SAMN05421747_103262 | Not Available | Positive | 1426036 - 1427124 | 41169.4 |
| 5'(3')-deoxyribonucleotidase | SAMN05421747_103263 | Not Available | Positive | 1427139 - 1427675 | 21110.2 |
| hypothetical protein | SAMN05421747_103264 | Not Available | Positive | 1427735 - 1428145 | 15246.2 |
| chromosomal replication initiator protein | SAMN05421747_103265 | Not Available | Negative | 1428222 - 1429649 | 53994.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
