Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ost-hth/lotus domain-containing protein | SAMN05421747_103226 | Not Available | Positive | 1394295 - 1395125 | 30744.0 |
| d-lactate dehydrogenase | SAMN05421747_103227 | Not Available | Negative | 1395158 - 1396156 | 36662.4 |
| hypothetical protein | SAMN05421747_103228 | Not Available | Negative | 1396203 - 1396565 | 13987.9 |
| yjbr protein | SAMN05421747_103229 | Not Available | Negative | 1396627 - 1396956 | 12134.3 |
| glutathione synthetase, atp-grasp domain | SAMN05421747_103230 | Not Available | Negative | 1396965 - 1397906 | 35299.2 |
| hypothetical protein | SAMN05421747_103231 | Not Available | Negative | 1398002 - 1398247 | 9104.03 |
| hypothetical protein | SAMN05421747_103232 | Not Available | Negative | 1398338 - 1399258 | 32970.2 |
| hypothetical protein | SAMN05421747_103233 | Not Available | Negative | 1399299 - 1400111 | 29264.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421747_103234 | Not Available | Negative | 1400108 - 1400665 | 21249.4 |
| protein of unknown function | SAMN05421747_103235 | Not Available | Positive | 1400798 - 1402609 | 67683.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
