Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | SAMN05421747_101109 | Not Available | Positive | 127433 - 128443 | 37207.4 |
| 1,4-alpha-glucan branching enzyme | SAMN05421747_101110 | Not Available | Positive | 128579 - 131161 | 95579.4 |
| iron complex outermembrane recepter protein | SAMN05421747_101111 | Not Available | Positive | 131237 - 134191 | 108404.0 |
| starch-binding associating with outer membrane | SAMN05421747_101112 | Not Available | Positive | 134204 - 135793 | 58318.4 |
| protein of unknown function | SAMN05421747_101113 | Not Available | Positive | 135810 - 136826 | 36966.1 |
| glycosidase | SAMN05421747_101114 | Not Available | Positive | 136843 - 138720 | 71828.8 |
| beta-phosphoglucomutase | SAMN05421747_101115 | Not Available | Positive | 138717 - 139385 | 23919.7 |
| maltose phosphorylase | SAMN05421747_101116 | Not Available | Positive | 139411 - 141732 | 88817.7 |
| maltose/moltooligosaccharide transporter | SAMN05421747_101117 | Not Available | Positive | 141729 - 143069 | 48575.3 |
| geranylgeranyl diphosphate synthase, type ii | SAMN05421747_101118 | Not Available | Negative | 143088 - 144062 | 35962.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
