Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_103206 | Not Available | Positive | 1378551 - 1378661 | 3975.79 |
| hypothetical protein | SAMN05421747_103207 | Not Available | Positive | 1378713 - 1379303 | 22439.0 |
| hypothetical protein | SAMN05421747_103208 | Not Available | Positive | 1379439 - 1379633 | 7465.94 |
| dna-binding transcriptional regulator, xre family | SAMN05421747_103209 | Not Available | Positive | 1379673 - 1380212 | 20336.2 |
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN05421747_103210 | Not Available | Positive | 1380464 - 1381486 | 40076.7 |
| hypothetical protein | SAMN05421747_103211 | Not Available | Positive | 1381891 - 1382154 | 9647.34 |
| hypothetical protein | SAMN05421747_103212 | Not Available | Positive | 1383108 - 1383488 | 14101.6 |
| phospholipase_d-nuclease n-terminal | SAMN05421747_103213 | Not Available | Positive | 1383905 - 1384144 | 8695.17 |
| biopolymer transport protein exbd | SAMN05421747_103214 | Not Available | Positive | 1384259 - 1384747 | 17878.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421747_103215 | Not Available | Positive | 1384976 - 1385740 | 27061.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
