Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| disulphide bond corrector protein dsbc | SAMN05421747_103166 | Not Available | Negative | 1329325 - 1329774 | 16455.2 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN05421747_103167 | Not Available | Negative | 1329876 - 1330646 | 28689.8 |
| ribosome-associated protein | SAMN05421747_103168 | Not Available | Positive | 1330695 - 1331069 | 14310.1 |
| cell division protease ftsh | SAMN05421747_103169 | Not Available | Positive | 1331104 - 1333206 | 77818.4 |
| l-lactate dehydrogenase complex protein lldg | SAMN05421747_103170 | Not Available | Positive | 1333206 - 1333862 | 24469.7 |
| dna repair photolyase | SAMN05421747_103171 | Not Available | Positive | 1334051 - 1335121 | 40091.6 |
| membrane associated serine protease, rhomboid family | SAMN05421747_103172 | Not Available | Positive | 1335165 - 1335791 | 23731.4 |
| solute:na+ symporter, sss family | SAMN05421747_103173 | Not Available | Positive | 1335958 - 1337634 | 60681.6 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN05421747_103174 | Not Available | Positive | 1337718 - 1340081 | 89548.9 |
| magnesium chelatase family protein | SAMN05421747_103175 | Not Available | Negative | 1340087 - 1341625 | 55440.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
