Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein beta-barrel domain-containing protein | SAMN05421747_103126 | Not Available | Positive | 1275951 - 1276823 | 33102.4 |
| abc-type fe3+/spermidine/putrescine transport systems, atpase components | SAMN05421747_103127 | Not Available | Positive | 1276886 - 1277941 | 38537.3 |
| dna-binding response regulator, lytr/algr family | SAMN05421747_103128 | Not Available | Negative | 1277979 - 1278662 | 25873.4 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421747_103129 | Not Available | Negative | 1278681 - 1279940 | 47965.0 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421747_103130 | Not Available | Negative | 1279990 - 1281465 | 55878.7 |
| histidine kinase | SAMN05421747_103131 | Not Available | Negative | 1281471 - 1282880 | 53625.1 |
| protein of unknown function | SAMN05421747_103132 | Not Available | Negative | 1282981 - 1284066 | 41005.3 |
| abc-2 type transport system atp-binding protein | SAMN05421747_103133 | Not Available | Positive | 1284395 - 1285177 | 28310.4 |
| hypothetical protein | SAMN05421747_103134 | Not Available | Positive | 1285189 - 1286874 | 63113.0 |
| predicted oxidoreductase | SAMN05421747_103135 | Not Available | Positive | 1287006 - 1288001 | 36717.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
