Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p | SAMN05421747_103116 | Not Available | Negative | 1266420 - 1266980 | 21122.0 |
| abc-type multidrug transport system, atpase component | SAMN05421747_103117 | Not Available | Negative | 1267185 - 1267805 | 23796.6 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | SAMN05421747_103118 | Not Available | Negative | 1267809 - 1268603 | 28818.8 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | SAMN05421747_103119 | Not Available | Negative | 1268600 - 1270015 | 52501.0 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMN05421747_103120 | Not Available | Negative | 1270033 - 1271073 | 37448.8 |
| hypothetical protein | SAMN05421747_103121 | Not Available | Negative | 1271126 - 1272427 | 49300.8 |
| response regulator receiver domain-containing protein | SAMN05421747_103122 | Not Available | Positive | 1272518 - 1274071 | 60402.3 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN05421747_103123 | Not Available | Positive | 1274094 - 1274510 | 15031.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421747_103124 | Not Available | Positive | 1274579 - 1275136 | 21232.4 |
| hypothetical protein | SAMN05421747_103125 | Not Available | Positive | 1275123 - 1275929 | 29303.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
