Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_10396 | Not Available | Positive | 1243879 - 1244343 | 18110.2 |
| dinuclear metal center protein, ybgi/sa1388 family | SAMN05421747_10397 | Not Available | Positive | 1244346 - 1245443 | 40229.2 |
| hypothetical protein | SAMN05421747_10398 | Not Available | Positive | 1245444 - 1246196 | 29160.8 |
| excinuclease abc subunit a | SAMN05421747_10399 | Not Available | Positive | 1246307 - 1249168 | 106577.0 |
| dna mismatch repair protein mutl | SAMN05421747_103100 | Not Available | Positive | 1249181 - 1251028 | 69018.7 |
| rhomboid-like protein | SAMN05421747_103101 | Not Available | Positive | 1251061 - 1251792 | 27212.1 |
| membrane associated serine protease, rhomboid family | SAMN05421747_103102 | Not Available | Positive | 1251926 - 1252786 | 31950.6 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05421747_103103 | Not Available | Positive | 1252811 - 1253914 | 41658.4 |
| hypothetical protein | SAMN05421747_103104 | Not Available | Negative | 1254289 - 1254405 | 4525.73 |
| phoh-like atpase | SAMN05421747_103105 | Not Available | Positive | 1254578 - 1255906 | 50131.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
