Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_10346 | Not Available | Negative | 1181031 - 1181225 | 7271.58 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_10347 | Not Available | Positive | 1181397 - 1184693 | 122154.0 |
| susd family protein | SAMN05421747_10348 | Not Available | Positive | 1184738 - 1185967 | 45534.9 |
| exopolysaccharide biosynthesis protein | SAMN05421747_10349 | Not Available | Positive | 1186002 - 1186943 | 34153.4 |
| putative binding domain-containing protein, n-terminal | SAMN05421747_10350 | Not Available | Positive | 1186967 - 1188724 | 60820.6 |
| tigr00255 family protein | SAMN05421747_10351 | Not Available | Positive | 1188882 - 1189745 | 32684.1 |
| guanylate kinase | SAMN05421747_10352 | Not Available | Positive | 1189745 - 1190317 | 21676.1 |
| nicotinate-nucleotide adenylyltransferase | SAMN05421747_10353 | Not Available | Positive | 1190330 - 1190911 | 22111.8 |
| hypothetical protein | SAMN05421747_10354 | Not Available | Negative | 1190983 - 1191192 | 7977.12 |
| heparinase ii/iii-like protein | SAMN05421747_10355 | Not Available | Negative | 1191275 - 1193182 | 72171.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
