Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein, luxr family | SAMN05421747_10336 | Not Available | Positive | 1174333 - 1174815 | 18249.7 |
| protein of unknown function | SAMN05421747_10337 | Not Available | Positive | 1174904 - 1175446 | 20129.1 |
| rrna maturation rnase ybey | SAMN05421747_10338 | Not Available | Negative | 1175455 - 1175880 | 16495.5 |
| putative holliday junction resolvase | SAMN05421747_10339 | Not Available | Negative | 1175912 - 1176349 | 16110.7 |
| hypothetical protein | SAMN05421747_10340 | Not Available | Negative | 1176375 - 1176572 | 7358.72 |
| dna polymerase-3 subunit beta | SAMN05421747_10341 | Not Available | Positive | 1176700 - 1177824 | 41137.6 |
| membrane-associated protein | SAMN05421747_10342 | Not Available | Positive | 1177830 - 1178483 | 24473.9 |
| cysteine-rich secretory protein family protein | SAMN05421747_10343 | Not Available | Positive | 1178497 - 1179099 | 22486.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421747_10344 | Not Available | Positive | 1179290 - 1179868 | 22484.2 |
| protein of unknown function | SAMN05421747_10345 | Not Available | Positive | 1179957 - 1181102 | 42664.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
