Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN05421747_10326 | Not Available | Positive | 1160926 - 1162575 | 61491.7 |
| excinuclease abc subunit a | SAMN05421747_10327 | Not Available | Positive | 1162668 - 1165472 | 103272.0 |
| putative abc transport system permease protein | SAMN05421747_10328 | Not Available | Negative | 1165556 - 1166803 | 44463.3 |
| phospholipase/carboxylesterase | SAMN05421747_10329 | Not Available | Negative | 1166861 - 1167682 | 30721.7 |
| repeat domain-containing protein | SAMN05421747_10330 | Not Available | Positive | 1168004 - 1169170 | 43086.6 |
| hypothetical protein | SAMN05421747_10331 | Not Available | Negative | 1169182 - 1170450 | 47811.3 |
| ferrochelatase | SAMN05421747_10332 | Not Available | Negative | 1170452 - 1171513 | 40076.2 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN05421747_10333 | Not Available | Negative | 1171587 - 1172435 | 31543.5 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421747_10334 | Not Available | Negative | 1172461 - 1173615 | 42517.7 |
| nucleoside-diphosphate kinase | SAMN05421747_10335 | Not Available | Positive | 1173737 - 1174132 | 14462.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
