Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacillithiol biosynthesis cysteine-adding enzyme bshc | SAMN05421747_10316 | Not Available | Negative | 1151999 - 1153588 | 60806.0 |
| ribosomal protein s12 methylthiotransferase | SAMN05421747_10317 | Not Available | Negative | 1153637 - 1154971 | 50316.1 |
| fused signal recognition particle receptor | SAMN05421747_10318 | Not Available | Negative | 1154981 - 1155946 | 34687.7 |
| protein of unknown function | SAMN05421747_10319 | Not Available | Negative | 1156034 - 1156219 | 6485.83 |
| large subunit ribosomal protein l33 | SAMN05421747_10320 | Not Available | Negative | 1156260 - 1156442 | 7022.74 |
| large subunit ribosomal protein l28 | SAMN05421747_10321 | Not Available | Negative | 1156492 - 1156725 | 8789.84 |
| ribosome-binding factor a | SAMN05421747_10322 | Not Available | Positive | 1156927 - 1157298 | 14243.0 |
| leucyl/phenylalanyl-trna--protein transferase | SAMN05421747_10323 | Not Available | Positive | 1157303 - 1157944 | 24059.0 |
| condensin subunit scpa | SAMN05421747_10324 | Not Available | Negative | 1157951 - 1158709 | 29497.6 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN05421747_10325 | Not Available | Positive | 1158829 - 1160757 | 70250.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
